This meansĬoNet is a network-based analysis tool, capable of finding non-random co-occurrence patterns in networks. If you disable this cookie, we will not be able to save your preferences. Strictly Necessary Cookie should be enabled at all times so that we can save your preferences for cookie settings.
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It searches both up- and down-stream for new edges.ĬoNet is thus a global search algorithm in which object co-occurrences are investigated at any graph distance, and the search is driven by the most significant connections.ĬoNet searches the whole graph at a time. It uses a model-based filter in order to minimize false-positive and false-negative co-occurrences. It is an edge-weighted graph search algorithm. Specially built as a Cytoscape plugin, CoNet is able to detect significant non-random patterns of co-occurrence.ĬoNet can find both copresence and mutual exclusion patterns in incidence and abundance data.Īlthough it was designed with ecological data in mind, CoNet can be applied in general to infer relationships between objects observed in different samples.
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